Single-cell RNA-seq AI analysis has become the default way to make sense of the millions of expression measurements a single experiment can now generate. Turning raw sequencing counts into ...

A framework for analyzing single-cell genomics data, in which geometrical properties are harnessed to obtain insights on cellular diversity, including precise clustering, clear visualizations, and ...

ARBO provides utilities for preprocessing, visualization, and spatial clustering of metabolomics mass spectrometry imaging (MSI) data, with support for Python-based UMAP embedding through reticulate, ...

This is a modernised ManagedCode-maintained reimplementation of the JavaScript version, which was based upon the Python version. "Uniform Manifold Approximation and Projection (UMAP) is a dimension ...

Single-cell multi-omics has transformed T-cell biology by enabling the simultaneous analysis of T-cell receptor (TCR) sequences, transcriptomes, and surface proteins at the resolution of individual ...

ABSTRACT: Bipolar disorder is a multifaceted psychiatric illness characterized by unpredictable mood episodes and highly variable treatment responses across individuals. Predicting response to ...

To explore the cellular composition and gene expression patterns in urine samples from AKI and non-AKI conditions using Uniform Manifold Approximation and Projection (UMAP) to identify key cellular ...