The Gillespie algorithm provides statistically exact methods for simulating stochastic dynamics modeled as interacting sequences of discrete events including systems of biochemical reactions or ...

Stochastic processes underpin dynamics across biology, physics, epidemiology, and finance, yet accurately simulating them remains a major challenge. Classical approaches such as the Gillespie ...

Detailed whole-cell modeling requires an integration of heterogeneous cell processes having different modeling formalisms, for which whole-cell simulation could remain tractable. Here, we introduce ...